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pPOD Community Meeting at NESCENT, September 11-12, 2007
Agenda
| Tuesday September 11 |
| 9:00-9:45 pPOD core data model, presentation and general discussion |
| 9:45-10:30 pPOD workflows 1, presentation and general discussion |
| 10:30-11:00 Break |
| 11:00-11:30 pPOD workflows 2, presentation and general discussion |
| 11:30:12:30 pPOD data integration, presentation and general discussion |
| 12:30-2:00 Break |
| 2:00-2:20 Gymnosperm AToL and LiToL data & TOLKIN, Reed Beaman |
| 2:20-2:40 AFToL data, Francois Lutzoni |
| 2:40-3:00 BToL data, David Maddison |
| 3:00-3:20 Spider AToL data, Jonathan Coddington |
| 3:20-3:50 Break |
| 3:50-4:50 AToL data needs, general discussion |
| 4:50-5:10 Data in Mesquite, Wayne Maddison |
| 5:10-5:30 BioSQL, Hilmar Lapp |
| Wednesday September 12 |
| 9:00-9:20 MorphoBank data, Maureen O’Leary and Seth Kaufman |
| 9:20-9:40 MorphBank data, Austin Mast and Greg Riccardi |
| 9:40-10:00 TreeBASE data, Bill Piel |
| 10:00-10:30 Phylodata resources, general discussion |
| 10:30-11:00 Break |
| 11:00-11:20 MIAPA, Jim Leebens-Mack |
| 11:20-11:40 neXML, Rutger Vos |
| 11:40-12:00 Phylodata standards, general discussion |
| 12:00-12:30 Conclusions, general discussion |
Notes
- Tuesday 11 September 2007
- 09:00-10:30: Preliminary material, Val's discussion of the pPOD CoreDataModel, Bertram Ludäscher's talk about Kepler and scientific dataflow
- 11:00-12:30: Susan Davidson's talk On Provenance and User Views in Scientific Workflows, Zach Ives' talk on Orchestra: a Platform for Exchanging Bioinformatics Data
- 14:00-15:20: Reed Beaman's talk about Gymnosperm AToL and LiToL data and TOLKIN, François Lutzoni's talk on AFToL data, David Maddison's talk on BToL data, Jonathan Coddington's talk on Spider AToL data''
- 15:50-17:30: General discussion on ATOL data needs, Wayne Maddison's talk about Data in Mesquite, Hilmar Lapp's talk about BioSQL
Other material
Attendees
| Zhuowei Bao, Univ. of Pennsylvania | Reed Beaman, Yale Univ./Univ. of Florida |
| Shawn Bowers, UC Davis | Peter Buneman, Univ. of Edinburgh |
| Jonathan Coddington, Smithsonian Institution | Susan Davidson, Univ. of Pennsylvania |
| Mark Dominus, Univ. of Pennsylvania | Todd J. Green, Univ. of Pennsylvania |
| Zack Ives, Univ. of Pennsylvania | Seth Kaufman, MorphoBank |
| Greg Karvounarakis, Univ. of Pennsylvania | Junhyong Kim, Univ. of Pennsylvania |
| Hilmar Lapp, NESCENT | Jim Leebens-Mack, Univ. of Georgia |
| Betram Ludäscher, UC Davis | François Lutzoni, Duke Univ. |
| David Maddison, Univ. of Arizona | Wayne Maddison, Univ. of British Columbia |
| Austin Mast, Florida State University | Tim McPhillips, UC Davis |
| Brent Mishler, UC Berkeley | Maureen O'Leary, SUNY Stonybrook |
| Bill Piel, Yale Univ. | Greg Riccardi, Florida State Univ. |
| Val Tannen, Univ. of Pennsylvania | Nick Taylor, Univ. of Pennsylvania |
| David Thau, UC Davis | Todd Vision, UNC and NESCENT |
| Rutger Vos, Univ. of British Columbia |
| Brian Wiegmann, NCSU and NESCENT |
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