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Meeting20070911

pPOD Community Meeting at NESCENT, September 11-12, 2007

Agenda

Tuesday September 11
9:00-9:45 pPOD core data model, presentation and general discussion
9:45-10:30 pPOD workflows 1, presentation and general discussion
10:30-11:00 Break
11:00-11:30 pPOD workflows 2, presentation and general discussion
11:30:12:30 pPOD data integration, presentation and general discussion
12:30-2:00 Break
2:00-2:20 Gymnosperm AToL and LiToL data & TOLKIN, Reed Beaman
2:20-2:40 AFToL data, Francois Lutzoni
2:40-3:00 BToL data, David Maddison
3:00-3:20 Spider AToL data, Jonathan Coddington
3:20-3:50 Break
3:50-4:50 AToL data needs, general discussion
4:50-5:10 Data in Mesquite, Wayne Maddison
5:10-5:30 BioSQL, Hilmar Lapp
Wednesday September 12
9:00-9:20 MorphoBank data, Maureen O’Leary and Seth Kaufman
9:20-9:40 MorphBank data, Austin Mast and Greg Riccardi
9:40-10:00 TreeBASE data, Bill Piel
10:00-10:30 Phylodata resources, general discussion
10:30-11:00 Break
11:00-11:20 MIAPA, Jim Leebens-Mack
11:20-11:40 neXML, Rutger Vos
11:40-12:00 Phylodata standards, general discussion
12:00-12:30 Conclusions, general discussion

Notes

  • Tuesday 11 September 2007
    • 09:00-10:30: Preliminary material, Val's discussion of the pPOD CoreDataModel, Bertram Ludäscher's talk about Kepler and scientific dataflow
    • 11:00-12:30: Susan Davidson's talk On Provenance and User Views in Scientific Workflows, Zach Ives' talk on Orchestra: a Platform for Exchanging Bioinformatics Data
    • 14:00-15:20: Reed Beaman's talk about Gymnosperm AToL and LiToL data and TOLKIN, François Lutzoni's talk on AFToL data, David Maddison's talk on BToL data, Jonathan Coddington's talk on Spider AToL data''
    • 15:50-17:30: General discussion on ATOL data needs, Wayne Maddison's talk about Data in Mesquite, Hilmar Lapp's talk about BioSQL

Other material

Attendees

Zhuowei Bao, Univ. of PennsylvaniaReed Beaman, Yale Univ./Univ. of Florida
Shawn Bowers, UC DavisPeter Buneman, Univ. of Edinburgh
Jonathan Coddington, Smithsonian InstitutionSusan Davidson, Univ. of Pennsylvania
Mark Dominus, Univ. of PennsylvaniaTodd J. Green, Univ. of Pennsylvania
Zack Ives, Univ. of PennsylvaniaSeth Kaufman, MorphoBank
Greg Karvounarakis, Univ. of PennsylvaniaJunhyong Kim, Univ. of Pennsylvania
Hilmar Lapp, NESCENTJim Leebens-Mack, Univ. of Georgia
Betram Ludäscher, UC DavisFrançois Lutzoni, Duke Univ.
David Maddison, Univ. of ArizonaWayne Maddison, Univ. of British Columbia
Austin Mast, Florida State UniversityTim McPhillips, UC Davis
Brent Mishler, UC BerkeleyMaureen O'Leary, SUNY Stonybrook
Bill Piel, Yale Univ.Greg Riccardi, Florida State Univ.
Val Tannen, Univ. of PennsylvaniaNick Taylor, Univ. of Pennsylvania
David Thau, UC DavisTodd Vision, UNC and NESCENT
Rutger Vos, Univ. of British Columbia
Brian Wiegmann, NCSU and NESCENT
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Page last modified on September 18, 2007, at 02:41 PM